Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 AC012441.2-201ENST00000444843 739 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 TUBB8P8-201ENST00000458717 1058 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC027237.1-201ENST00000560942 655 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC009884.2-201ENST00000603110 324 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 MIR6720-201ENST00000611664 98 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AL023803.2-201ENST00000620080 638 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AL162426.1-201ENST00000624141 743 ntBASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC12Q8WUD4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
CCDC12Q8WUD4 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 POM121L10P-201ENST00000436994 1285 ntBASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 PFN1P12-201ENST00000455938 534 ntBASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 AC091271.1-201ENST00000611877 1162 ntBASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 AL096828.3-201ENST00000615354 462 ntBASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC12Q8WUD4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AC244394.1-201ENST00000435000 1665 ntBASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AL591846.1-201ENST00000451736 433 ntBASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AC021723.1-201ENST00000486306 515 ntBASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 FAM8A2P-201ENST00000528813 1142 ntBASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC12Q8WUD4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 245 ms