Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SHROOM3Q8TF72 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.83□□□□□ -0.04
SHROOM3Q8TF72 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC090643.2-201ENST00000623442 2029 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC092580.1-201ENST00000433998 658 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC008825.2-201ENST00000603374 718 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC022748.3-201ENST00000621828 275 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 KRT8P21-201ENST00000430398 1491 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC018735.1-201ENST00000437208 1502 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 VDAC1P1-201ENST00000439229 848 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 Z93015.1-201ENST00000451718 390 ntBASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.82□□□□□ -0.04
SHROOM3Q8TF72 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 FAM58BP-201ENST00000439056 645 ntBASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 AP001258.2-201ENST00000529891 490 ntBASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 AC133540.1-201ENST00000620845 1019 ntBASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHROOM3Q8TF72 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms