Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA8Q53HL2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 CCT8L1P-201ENST00000465400 1674 ntBASIC19.98■□□□□ 0.79
CDCA8Q53HL2 DUX4L50-201ENST00000455245 715 ntBASIC19.98■□□□□ 0.79
CDCA8Q53HL2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDCA8Q53HL2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 PHBP15-201ENST00000574228 665 ntBASIC19.97■□□□□ 0.79
CDCA8Q53HL2 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 AF254983.2-201ENST00000612331 135 ntBASIC19.97■□□□□ 0.79
CDCA8Q53HL2 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 OR2I1P-209ENST00000641730 5365 ntBASIC19.97■□□□□ 0.79
CDCA8Q53HL2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA8Q53HL2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC015909.3-201ENST00000572855 1794 ntBASIC19.96■□□□□ 0.79
CDCA8Q53HL2 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC008723.1-201ENST00000506922 207 ntBASIC19.96■□□□□ 0.79
CDCA8Q53HL2 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 RTN3P1-201ENST00000536295 711 ntBASIC19.96■□□□□ 0.79
CDCA8Q53HL2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC079336.7-201ENST00000623428 1078 ntBASIC19.96■□□□□ 0.79
CDCA8Q53HL2 AC006453.1-201ENST00000636037 1257 ntBASIC19.96■□□□□ 0.79
CDCA8Q53HL2 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA8Q53HL2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms