Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC10.89□□□□□ -0.67
CMC4P56277 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC10.89□□□□□ -0.67
CMC4P56277 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 BNIP3P13-201ENST00000599968 566 ntBASIC10.89□□□□□ -0.67
CMC4P56277 AL096828.3-201ENST00000615354 462 ntBASIC10.89□□□□□ -0.67
CMC4P56277 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CMC4P56277 AC100757.4-201ENST00000626934 759 ntBASIC10.89□□□□□ -0.67
CMC4P56277 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CMC4P56277 E2F3P2-201ENST00000447755 1422 ntBASIC10.89□□□□□ -0.67
CMC4P56277 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CMC4P56277 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC10.89□□□□□ -0.67
CMC4P56277 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.89□□□□□ -0.67
CMC4P56277 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC10.89□□□□□ -0.67
CMC4P56277 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CMC4P56277 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 AC215219.1-201ENST00000400706 1817 ntBASIC10.88□□□□□ -0.67
CMC4P56277 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 MAPK10-262ENST00000641051 5738 ntBASIC10.88□□□□□ -0.67
CMC4P56277 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC10.88□□□□□ -0.67
CMC4P56277 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.88□□□□□ -0.67
CMC4P56277 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 AC092658.1-201ENST00000505836 891 ntBASIC10.88□□□□□ -0.67
CMC4P56277 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 AC015802.1-201ENST00000588104 1449 ntBASIC10.88□□□□□ -0.67
CMC4P56277 AC008805.1-201ENST00000590892 364 ntBASIC10.88□□□□□ -0.67
CMC4P56277 NKG7-204ENST00000595217 816 ntTSL 2 BASIC10.88□□□□□ -0.67
CMC4P56277 MIR6799-201ENST00000620297 69 ntBASIC10.88□□□□□ -0.67
CMC4P56277 AL008638.5-201ENST00000623814 1298 ntBASIC10.88□□□□□ -0.67
CMC4P56277 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 AL033527.4-201ENST00000641026 673 ntBASIC10.88□□□□□ -0.67
CMC4P56277 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
CMC4P56277 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CMC4P56277 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CMC4P56277 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CMC4P56277 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CMC4P56277 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CMC4P56277 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms