Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.32□□□□□ -0.28
HMGA2P52926 AC068587.3-201ENST00000526613 355 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
HMGA2P52926 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 CHCHD2P3-201ENST00000603038 451 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 AC009118.2-201ENST00000613275 655 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 AC093512.1-201ENST00000617969 520 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HMGA2P52926 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 PDIA3P1-201ENST00000471856 1510 ntBASIC13.32□□□□□ -0.28
HMGA2P52926 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.32□□□□□ -0.28
HMGA2P52926 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.32□□□□□ -0.28
HMGA2P52926 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HMGA2P52926 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
HMGA2P52926 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HMGA2P52926 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 AC136604.1-202ENST00000425471 771 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 METTL21AP1-201ENST00000438852 635 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.31□□□□□ -0.28
HMGA2P52926 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.31□□□□□ -0.28
HMGA2P52926 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.31□□□□□ -0.28
HMGA2P52926 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 AC008825.2-201ENST00000603374 718 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 CU634019.7-201ENST00000624153 1185 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 FP236241.2-201ENST00000624906 1185 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 AL359845.1-201ENST00000458202 1648 ntBASIC13.31□□□□□ -0.28
HMGA2P52926 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.31□□□□□ -0.28
HMGA2P52926 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HMGA2P52926 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HMGA2P52926 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HMGA2P52926 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HMGA2P52926 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.3□□□□□ -0.28
HMGA2P52926 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 AGAP12P-201ENST00000585227 2359 ntBASIC13.3□□□□□ -0.28
HMGA2P52926 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HMGA2P52926 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HMGA2P52926 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.3□□□□□ -0.28
HMGA2P52926 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms