Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 AL645933.1-201ENST00000440087 609 ntBASIC14.74□□□□□ -0.05
CHRNA4P43681 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.74□□□□□ -0.05
CHRNA4P43681 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNA4P43681 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNA4P43681 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.74□□□□□ -0.05
CHRNA4P43681 AC010328.2-201ENST00000597698 1111 ntBASIC14.74□□□□□ -0.05
CHRNA4P43681 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 GRK6P1-201ENST00000400595 1711 ntBASIC14.74□□□□□ -0.05
CHRNA4P43681 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
CHRNA4P43681 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CHRNA4P43681 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.74□□□□□ -0.05
CHRNA4P43681 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHRNA4P43681 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHRNA4P43681 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 AL365209.1-201ENST00000624418 6473 ntBASIC14.73□□□□□ -0.05
CHRNA4P43681 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 AC079178.1-201ENST00000420915 656 ntBASIC14.73□□□□□ -0.05
CHRNA4P43681 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA4P43681 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 MIR6720-201ENST00000611664 98 ntBASIC14.73□□□□□ -0.05
CHRNA4P43681 AC244157.2-201ENST00000616239 1006 ntBASIC14.73□□□□□ -0.05
CHRNA4P43681 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CHRNA4P43681 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA4P43681 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CHRNA4P43681 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.73□□□□□ -0.05
CHRNA4P43681 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.73□□□□□ -0.05
CHRNA4P43681 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHRNA4P43681 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CHRNA4P43681 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CHRNA4P43681 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 GK-202ENST00000378941 458 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNA4P43681 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CHRNA4P43681 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.72□□□□□ -0.05
CHRNA4P43681 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.72□□□□□ -0.05
CHRNA4P43681 FAM21FP-201ENST00000426241 1131 ntBASIC14.72□□□□□ -0.05
CHRNA4P43681 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CHRNA4P43681 AL157407.1-201ENST00000435784 904 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms