Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
MMP11P24347 E2F3P2-201ENST00000447755 1422 ntBASIC13.9□□□□□ -0.19
MMP11P24347 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.9□□□□□ -0.19
MMP11P24347 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.19
MMP11P24347 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 MIR769-201ENST00000390225 118 ntBASIC13.89□□□□□ -0.19
MMP11P24347 AL662890.1-201ENST00000396818 632 ntBASIC13.89□□□□□ -0.19
MMP11P24347 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.89□□□□□ -0.19
MMP11P24347 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.89□□□□□ -0.19
MMP11P24347 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.89□□□□□ -0.19
MMP11P24347 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.89□□□□□ -0.19
MMP11P24347 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 AL136295.7-201ENST00000619226 1200 ntBASIC13.89□□□□□ -0.19
MMP11P24347 AC100757.4-201ENST00000626934 759 ntBASIC13.89□□□□□ -0.19
MMP11P24347 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
MMP11P24347 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.89□□□□□ -0.19
MMP11P24347 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MMP11P24347 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.88□□□□□ -0.19
MMP11P24347 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
MMP11P24347 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MMP11P24347 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MMP11P24347 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
MMP11P24347 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 AC011742.3-201ENST00000439053 820 ntBASIC13.88□□□□□ -0.19
MMP11P24347 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 AC022217.1-201ENST00000521069 738 ntBASIC13.88□□□□□ -0.19
MMP11P24347 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 AC132192.2-201ENST00000596206 1147 ntBASIC13.88□□□□□ -0.19
MMP11P24347 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 AC084346.2-201ENST00000607097 949 ntBASIC13.88□□□□□ -0.19
MMP11P24347 BX088702.1-201ENST00000610784 235 ntBASIC13.88□□□□□ -0.19
MMP11P24347 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MMP11P24347 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
MMP11P24347 AL365209.1-201ENST00000624418 6473 ntBASIC13.88□□□□□ -0.19
MMP11P24347 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
MMP11P24347 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
MMP11P24347 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.88□□□□□ -0.19
MMP11P24347 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MMP11P24347 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms