Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 RARRES2P5-201ENST00000564013 466 ntBASIC13.87□□□□□ -0.19
NCK1P16333 SNHG9-202ENST00000564014 471 ntBASIC13.87□□□□□ -0.19
NCK1P16333 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 PEG13-201ENST00000631594 5667 ntBASIC13.87□□□□□ -0.19
NCK1P16333 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.86□□□□□ -0.19
NCK1P16333 AC009477.1-201ENST00000452936 217 ntBASIC13.86□□□□□ -0.19
NCK1P16333 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.86□□□□□ -0.19
NCK1P16333 AC135586.1-201ENST00000539323 574 ntBASIC13.86□□□□□ -0.19
NCK1P16333 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.86□□□□□ -0.19
NCK1P16333 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 AC004790.1-201ENST00000612686 536 ntBASIC13.86□□□□□ -0.19
NCK1P16333 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 AC004840.1-201ENST00000636359 365 ntBASIC13.86□□□□□ -0.19
NCK1P16333 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
NCK1P16333 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.86□□□□□ -0.19
NCK1P16333 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
NCK1P16333 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NCK1P16333 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NCK1P16333 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
NCK1P16333 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.85□□□□□ -0.19
NCK1P16333 AC004945.1-201ENST00000416738 983 ntBASIC13.85□□□□□ -0.19
NCK1P16333 TSSK5P-201ENST00000423978 907 ntBASIC13.85□□□□□ -0.19
NCK1P16333 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.85□□□□□ -0.19
NCK1P16333 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.85□□□□□ -0.19
NCK1P16333 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.85□□□□□ -0.19
NCK1P16333 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.85□□□□□ -0.19
NCK1P16333 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
NCK1P16333 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.85□□□□□ -0.19
NCK1P16333 AC008738.7-201ENST00000609744 511 ntBASIC13.85□□□□□ -0.19
NCK1P16333 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
NCK1P16333 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms