Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.24□□□□□ -0.29
FREM3P0C091 RCC2P8-201ENST00000502779 1035 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM3P0C091 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
FREM3P0C091 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM3P0C091 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 AC092299.1-201ENST00000632679 757 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 HSPA7-201ENST00000445535 1927 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
FREM3P0C091 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM3P0C091 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.24□□□□□ -0.29
FREM3P0C091 EEF1DP6-201ENST00000449232 372 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.24□□□□□ -0.29
FREM3P0C091 RHOQP1-201ENST00000555758 579 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.24□□□□□ -0.29
FREM3P0C091 AL805961.1-203ENST00000641078 1258 ntBASIC13.24□□□□□ -0.29
FREM3P0C091 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
FREM3P0C091 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
FREM3P0C091 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 ACTG1P2-201ENST00000415776 1125 ntBASIC13.23□□□□□ -0.29
FREM3P0C091 ACTG1P11-201ENST00000425411 1125 ntBASIC13.23□□□□□ -0.29
FREM3P0C091 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 AC104073.2-201ENST00000453737 312 ntBASIC13.23□□□□□ -0.29
FREM3P0C091 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC13.23□□□□□ -0.29
FREM3P0C091 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 AC152010.1-201ENST00000415779 2006 ntBASIC13.23□□□□□ -0.29
FREM3P0C091 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
FREM3P0C091 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
FREM3P0C091 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
FREM3P0C091 FLJ16779-201ENST00000612722 7638 ntBASIC13.23□□□□□ -0.29
FREM3P0C091 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms