Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRT6AP02538 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.23□□□□□ -0.13
KRT6AP02538 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 AC011498.7-201ENST00000624986 2027 ntBASIC14.22□□□□□ -0.13
KRT6AP02538 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.22□□□□□ -0.13
KRT6AP02538 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
KRT6AP02538 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 RN7SKP175-201ENST00000408472 289 ntBASIC14.22□□□□□ -0.13
KRT6AP02538 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.22□□□□□ -0.13
KRT6AP02538 AL391280.1-201ENST00000506969 1062 ntBASIC14.22□□□□□ -0.13
KRT6AP02538 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.22□□□□□ -0.13
KRT6AP02538 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
KRT6AP02538 SORD2P-201ENST00000558556 1069 ntBASIC14.22□□□□□ -0.13
KRT6AP02538 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.22□□□□□ -0.13
KRT6AP02538 AC027307.3-201ENST00000594262 1100 ntBASIC14.22□□□□□ -0.13
KRT6AP02538 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KRT6AP02538 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
KRT6AP02538 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.22□□□□□ -0.13
KRT6AP02538 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
KRT6AP02538 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.22□□□□□ -0.13
KRT6AP02538 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRT6AP02538 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.21□□□□□ -0.13
KRT6AP02538 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
KRT6AP02538 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.21□□□□□ -0.13
KRT6AP02538 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6AP02538 C2orf27AP3-201ENST00000434123 579 ntBASIC14.21□□□□□ -0.13
KRT6AP02538 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6AP02538 AC106760.1-201ENST00000508690 800 ntBASIC14.21□□□□□ -0.13
KRT6AP02538 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.21□□□□□ -0.13
KRT6AP02538 AP001889.1-201ENST00000525414 633 ntBASIC14.21□□□□□ -0.13
KRT6AP02538 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.21□□□□□ -0.13
KRT6AP02538 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
KRT6AP02538 AL354718.3-201ENST00000616414 581 ntBASIC14.21□□□□□ -0.13
KRT6AP02538 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms