Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LCA5LO95447 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 AGAP12P-201ENST00000585227 2359 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 AL391647.1-201ENST00000395664 511 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 FAM207CP-201ENST00000443486 507 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.48■□□□□ 0.07
LCA5LO95447 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 AC025279.2-201ENST00000569730 653 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.48■□□□□ 0.07
LCA5LO95447 MIR5189-201ENST00000577370 114 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 AC004233.3-201ENST00000607794 1269 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 AC027601.3-201ENST00000622907 509 ntBASIC15.48■□□□□ 0.07
LCA5LO95447 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
LCA5LO95447 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.48■□□□□ 0.07
LCA5LO95447 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LCA5LO95447 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
LCA5LO95447 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 AL359845.1-201ENST00000458202 1648 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.47■□□□□ 0.07
LCA5LO95447 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 TPM3P8-201ENST00000330554 643 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.47■□□□□ 0.07
LCA5LO95447 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 COX20P2-201ENST00000452636 358 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.47■□□□□ 0.07
LCA5LO95447 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.47■□□□□ 0.07
LCA5LO95447 PTP4A1P2-201ENST00000546033 454 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.47■□□□□ 0.07
LCA5LO95447 MIR4683-201ENST00000579659 81 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.47■□□□□ 0.07
LCA5LO95447 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC15.47■□□□□ 0.07
LCA5LO95447 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.47■□□□□ 0.07
LCA5LO95447 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.47■□□□□ 0.07
LCA5LO95447 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LCA5LO95447 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms