Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 AC015802.1-201ENST00000588104 1449 ntBASIC15.36■□□□□ 0.05
OPHN1O60890 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 AP001267.2-201ENST00000532619 2086 ntBASIC15.36■□□□□ 0.05
OPHN1O60890 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.36■□□□□ 0.05
OPHN1O60890 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.36■□□□□ 0.05
OPHN1O60890 KRT18P25-201ENST00000508931 1278 ntBASIC15.36■□□□□ 0.05
OPHN1O60890 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.36■□□□□ 0.05
OPHN1O60890 AC025279.2-201ENST00000569730 653 ntBASIC15.36■□□□□ 0.05
OPHN1O60890 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.36■□□□□ 0.05
OPHN1O60890 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.36■□□□□ 0.05
OPHN1O60890 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 AL354702.1-201ENST00000442006 1960 ntBASIC15.36■□□□□ 0.05
OPHN1O60890 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
OPHN1O60890 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
OPHN1O60890 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
OPHN1O60890 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
OPHN1O60890 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 TLE1P1-201ENST00000422965 589 ntBASIC15.35■□□□□ 0.05
OPHN1O60890 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.35■□□□□ 0.05
OPHN1O60890 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.35■□□□□ 0.05
OPHN1O60890 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.35■□□□□ 0.05
OPHN1O60890 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.35■□□□□ 0.05
OPHN1O60890 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 AC138951.2-201ENST00000623455 1161 ntBASIC15.35■□□□□ 0.05
OPHN1O60890 AL008638.5-201ENST00000623814 1298 ntBASIC15.35■□□□□ 0.05
OPHN1O60890 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 AC097359.2-201ENST00000604992 2389 ntBASIC15.35■□□□□ 0.05
OPHN1O60890 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.35■□□□□ 0.05
OPHN1O60890 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.35■□□□□ 0.05
OPHN1O60890 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.35■□□□□ 0.05
OPHN1O60890 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
OPHN1O60890 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms