Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL354861.1-201ENST00000445213 355 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 PIN4P1-201ENST00000451079 396 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.96■□□□□ 0.31
CTNND1O60716 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.96■□□□□ 0.31
CTNND1O60716 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.96■□□□□ 0.31
CTNND1O60716 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 AC140658.4-201ENST00000561990 352 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.96■□□□□ 0.31
CTNND1O60716 MIR3180-2-201ENST00000581748 88 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC16.96■□□□□ 0.31
CTNND1O60716 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNND1O60716 AC105137.3-201ENST00000617588 984 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 AC073911.3-201ENST00000624401 631 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 AL132780.4-201ENST00000624870 1135 ntBASIC16.96■□□□□ 0.31
CTNND1O60716 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.96■□□□□ 0.31
CTNND1O60716 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CTNND1O60716 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTNND1O60716 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTNND1O60716 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CTNND1O60716 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CTNND1O60716 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.96■□□□□ 0.3
CTNND1O60716 LINC01815-202ENST00000641468 1409 ntBASIC16.96■□□□□ 0.3
CTNND1O60716 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.95■□□□□ 0.3
CTNND1O60716 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNND1O60716 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.95■□□□□ 0.3
CTNND1O60716 RN7SL470P-201ENST00000583069 259 ntBASIC16.95■□□□□ 0.3
CTNND1O60716 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CTNND1O60716 AC021016.3-201ENST00000608367 477 ntBASIC16.95■□□□□ 0.3
CTNND1O60716 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTNND1O60716 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.95■□□□□ 0.3
CTNND1O60716 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CTNND1O60716 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CTNND1O60716 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CTNND1O60716 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CTNND1O60716 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 AC090502.4-201ENST00000551714 1386 ntBASIC16.94■□□□□ 0.3
CTNND1O60716 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 AC018442.1-201ENST00000421439 2061 ntBASIC16.94■□□□□ 0.3
CTNND1O60716 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 AL512306.1-201ENST00000432698 848 ntBASIC16.94■□□□□ 0.3
CTNND1O60716 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 RPL18AP8-201ENST00000486071 528 ntBASIC16.94■□□□□ 0.3
CTNND1O60716 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.94■□□□□ 0.3
CTNND1O60716 AC138701.2-201ENST00000553634 226 ntBASIC16.94■□□□□ 0.3
CTNND1O60716 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.94■□□□□ 0.3
CTNND1O60716 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.94■□□□□ 0.3
CTNND1O60716 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CTNND1O60716 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CTNND1O60716 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CTNND1O60716 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNND1O60716 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms