Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DDX49Q9Y6V7 TCAF1P1-201ENST00000414990 2232 ntBASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 KRT90P-201ENST00000549264 1064 ntBASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
DDX49Q9Y6V7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AC130686.1-201ENST00000622936 2466 ntBASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AC009486.1-201ENST00000569860 813 ntBASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
DDX49Q9Y6V7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
DDX49Q9Y6V7 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
DDX49Q9Y6V7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
DDX49Q9Y6V7 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX49Q9Y6V7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
DDX49Q9Y6V7 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms