Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC068587.3-201ENST00000526613 355 ntBASIC14.43□□□□□ -0.1
MKS1Q9NXB0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC123567.1-201ENST00000548294 1261 ntBASIC14.43□□□□□ -0.1
MKS1Q9NXB0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.43□□□□□ -0.1
MKS1Q9NXB0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 PDIA3P1-201ENST00000471856 1510 ntBASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 DFFBP1-201ENST00000433250 979 ntBASIC14.42□□□□□ -0.1
MKS1Q9NXB0 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
MKS1Q9NXB0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 BEND3P3-201ENST00000611030 2440 ntBASIC14.41□□□□□ -0.1
MKS1Q9NXB0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
MKS1Q9NXB0 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms