Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 UPF3AP3-201ENST00000420996 769 ntBASIC14.28□□□□□ -0.12
EBF4Q9BQW3 TREML5P-201ENST00000421694 576 ntBASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AC114812.1-204ENST00000449669 728 ntBASIC14.28□□□□□ -0.12
EBF4Q9BQW3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AP002761.4-201ENST00000565433 3361 ntBASIC14.28□□□□□ -0.12
EBF4Q9BQW3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 BRI3BPP1-201ENST00000594224 787 ntBASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
EBF4Q9BQW3 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
EBF4Q9BQW3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC135586.1-201ENST00000539323 574 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC023310.3-201ENST00000557027 670 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC100756.1-201ENST00000562736 682 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC138749.3-201ENST00000567691 622 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC008738.7-201ENST00000609744 511 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AC116165.1-201ENST00000611806 668 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 AL603764.1-201ENST00000636452 321 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.27□□□□□ -0.13
EBF4Q9BQW3 PCDHA6-201ENST00000378126 3267 ntBASIC14.27□□□□□ -0.13
EBF4Q9BQW3 MEX3B-202ENST00000558133 4333 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms