Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CCL13Q99616 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.28□□□□□ -0.44
CCL13Q99616 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 RN7SL219P-201ENST00000582872 296 ntBASIC12.28□□□□□ -0.44
CCL13Q99616 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 AL096828.3-201ENST00000615354 462 ntBASIC12.28□□□□□ -0.44
CCL13Q99616 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL13Q99616 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL13Q99616 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.28□□□□□ -0.44
CCL13Q99616 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.28□□□□□ -0.44
CCL13Q99616 KHSRPP1-201ENST00000427983 1768 ntBASIC12.28□□□□□ -0.44
CCL13Q99616 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CCL13Q99616 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.28□□□□□ -0.44
CCL13Q99616 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.44
CCL13Q99616 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL13Q99616 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CCL13Q99616 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
CCL13Q99616 AL590440.2-201ENST00000641973 1595 ntBASIC12.27□□□□□ -0.44
CCL13Q99616 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.27□□□□□ -0.44
CCL13Q99616 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL13Q99616 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 AL354877.1-201ENST00000424412 413 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL13Q99616 HSPB1P2-201ENST00000448722 546 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 AC021723.1-201ENST00000486306 515 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL13Q99616 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.27□□□□□ -0.45
CCL13Q99616 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL13Q99616 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 AC104982.3-201ENST00000581995 514 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 AC132192.2-201ENST00000596206 1147 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL13Q99616 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.27□□□□□ -0.45
CCL13Q99616 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.27□□□□□ -0.45
CCL13Q99616 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.27□□□□□ -0.45
CCL13Q99616 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CCL13Q99616 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 AC215219.1-201ENST00000400706 1817 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 KRT8P28-201ENST00000433288 1390 ntBASIC12.27□□□□□ -0.45
CCL13Q99616 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CCL13Q99616 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC12.27□□□□□ -0.45
CCL13Q99616 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CCL13Q99616 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.26□□□□□ -0.45
CCL13Q99616 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL13Q99616 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms