Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RPRD1AQ96P16 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
RPRD1AQ96P16 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RPRD1AQ96P16 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.08■□□□□ 0
RPRD1AQ96P16 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPRD1AQ96P16 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.08■□□□□ 0
RPRD1AQ96P16 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.08■□□□□ 0
RPRD1AQ96P16 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RPRD1AQ96P16 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 SBF1P1-201ENST00000444527 5631 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC144522.1-201ENST00000625111 1658 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC136759.1-202ENST00000530858 2194 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.07■□□□□ 0
RPRD1AQ96P16 SCARNA21-201ENST00000517026 139 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC027237.1-201ENST00000560942 655 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 AC013355.1-201ENST00000562625 723 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 MIR3615-201ENST00000581999 87 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC090164.2-201ENST00000611487 516 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 MIR6787-201ENST00000616675 61 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 AC068587.8-201ENST00000641239 219 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC215219.1-201ENST00000400706 1817 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC097359.2-201ENST00000604992 2389 ntBASIC15.07■□□□□ 0
RPRD1AQ96P16 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.07■□□□□ 0
RPRD1AQ96P16 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.07■□□□□ 0
RPRD1AQ96P16 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
RPRD1AQ96P16 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RPRD1AQ96P16 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RPRD1AQ96P16 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.06■□□□□ 0
RPRD1AQ96P16 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.06■□□□□ 0
RPRD1AQ96P16 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RPRD1AQ96P16 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RPRD1AQ96P16 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.06■□□□□ 0
RPRD1AQ96P16 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.06■□□□□ 0
RPRD1AQ96P16 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.06■□□□□ 0
RPRD1AQ96P16 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.06■□□□□ 0
RPRD1AQ96P16 VDAC1P1-201ENST00000439229 848 ntBASIC15.06■□□□□ 0
RPRD1AQ96P16 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.06■□□□□ 0
RPRD1AQ96P16 EIF4HP1-201ENST00000453115 687 ntBASIC15.06■□□□□ 0
RPRD1AQ96P16 AC006122.1-201ENST00000493323 440 ntBASIC15.06■□□□□ 0
RPRD1AQ96P16 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.06■□□□□ 0
RPRD1AQ96P16 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms