Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.89□□□□□ -0.19
TM9SF4Q92544 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
TM9SF4Q92544 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF4Q92544 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TM9SF4Q92544 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF4Q92544 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TM9SF4Q92544 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AP000845.1-201ENST00000581677 2131 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC113367.3-201ENST00000508316 1912 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AL354877.1-201ENST00000424412 413 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 TUBB8P8-201ENST00000458717 1058 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC245884.6-201ENST00000515672 1067 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC138466.3-201ENST00000619983 221 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC018735.1-201ENST00000437208 1502 ntBASIC13.88□□□□□ -0.19
TM9SF4Q92544 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TM9SF4Q92544 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TM9SF4Q92544 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 MAGEA5-201ENST00000446757 942 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 HIST2H2BB-201ENST00000449108 381 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 RN7SL769P-201ENST00000469386 295 ntBASIC13.87□□□□□ -0.19
TM9SF4Q92544 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF4Q92544 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF4Q92544 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms