Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AC068587.6-202ENST00000641839 5619 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 KRT8P29-201ENST00000420409 1371 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 PGAM1P5-201ENST00000548011 764 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AC021016.3-201ENST00000608367 477 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AC111170.3-201ENST00000624282 2464 ntBASIC15.55■□□□□ 0.08
LMO3Q8TAP4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LMO3Q8TAP4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC067930.6-201ENST00000623257 4947 ntBASIC15.54■□□□□ 0.08
LMO3Q8TAP4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 BTBD6P1-201ENST00000412176 1267 ntBASIC15.54■□□□□ 0.08
LMO3Q8TAP4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 XBP1P1-201ENST00000436573 652 ntBASIC15.54■□□□□ 0.08
LMO3Q8TAP4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AC239800.4-201ENST00000603712 296 ntBASIC15.54■□□□□ 0.08
LMO3Q8TAP4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LMO3Q8TAP4 CCT8L1P-201ENST00000465400 1674 ntBASIC15.54■□□□□ 0.08
LMO3Q8TAP4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 AC130686.1-201ENST00000622936 2466 ntBASIC15.53■□□□□ 0.08
LMO3Q8TAP4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LMO3Q8TAP4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms