Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AC073413.1-201ENST00000603927 732 ntBASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCDC33Q8N5R6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 BX640514.1-201ENST00000583223 1918 ntBASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC092506.1-202ENST00000401022 528 ntBASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 EIF4HP1-201ENST00000453115 687 ntBASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 AC007326.2-201ENST00000624224 7579 ntBASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CLUHP2-201ENST00000426660 1303 ntBASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC33Q8N5R6 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 AL354702.1-201ENST00000442006 1960 ntBASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC33Q8N5R6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms