Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM5Q71RC9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 OR10N1P-201ENST00000392758 869 ntBASIC18.1■□□□□ 0.49
SMIM5Q71RC9 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 IGHEP2-201ENST00000519308 1256 ntBASIC18.1■□□□□ 0.49
SMIM5Q71RC9 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM5Q71RC9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 ODCP-201ENST00000459650 1639 ntBASIC18.09■□□□□ 0.49
SMIM5Q71RC9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 LAP3P2-201ENST00000454686 1454 ntBASIC18.09■□□□□ 0.49
SMIM5Q71RC9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 IGHEP1-201ENST00000521393 651 ntBASIC18.09■□□□□ 0.49
SMIM5Q71RC9 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.09■□□□□ 0.49
SMIM5Q71RC9 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM5Q71RC9 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM5Q71RC9 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 SERBP1P2-201ENST00000436888 1164 ntBASIC18.08■□□□□ 0.48
SMIM5Q71RC9 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 GRPEL2P1-201ENST00000453145 339 ntBASIC18.08■□□□□ 0.48
SMIM5Q71RC9 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.08■□□□□ 0.48
SMIM5Q71RC9 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms