Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC099568.2-201ENST00000609194 695 ntBASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 AC074044.1-201ENST00000609673 707 ntBASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
FOXR1Q6PIV2 TRIM80P-201ENST00000455685 2848 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SLC9A3P3-201ENST00000457608 2229 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SNX29P1-201ENST00000548357 1007 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC008735.3-201ENST00000596646 500 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MIR8072-201ENST00000614241 80 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 COX11-210ENST00000639671 696 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AL033527.4-201ENST00000641026 673 ntBASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXR1Q6PIV2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AP005482.1-201ENST00000563722 1273 ntBASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 AC010319.3-201ENST00000597028 470 ntBASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXR1Q6PIV2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms