Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AC055811.3-201ENST00000584952 686 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AQP7P3-201ENST00000624547 1041 ntBASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LYSMD4Q5XG99 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AP005264.6-204ENST00000588436 719 ntBASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AC010976.2-201ENST00000609697 852 ntBASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LYSMD4Q5XG99 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC006987.1-201ENST00000413610 527 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 DDX39AP1-201ENST00000445147 1181 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC012158.2-201ENST00000536546 354 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 AC005586.2-201ENST00000563946 837 ntBASIC14.16□□□□□ -0.14
LYSMD4Q5XG99 NDUFB10P1-201ENST00000567319 521 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms