Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TTC39BQ5VTQ0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 POM121L10P-201ENST00000436994 1285 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 PUDPP3-201ENST00000445368 636 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AC100850.1-201ENST00000506768 649 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 FAM8A2P-201ENST00000528813 1142 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AC005695.3-201ENST00000614522 232 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AL589935.2-201ENST00000616471 1231 ntBASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.28■□□□□ 0.04
TTC39BQ5VTQ0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 MRPL37P1-201ENST00000592451 1337 ntBASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 FAM58BP-201ENST00000439056 645 ntBASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AL035414.1-201ENST00000451327 857 ntBASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 AL096828.3-201ENST00000615354 462 ntBASIC15.27■□□□□ 0.04
TTC39BQ5VTQ0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.27■□□□□ 0.03
TTC39BQ5VTQ0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms