Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC097359.2-201ENST00000604992 2389 ntBASIC11.87□□□□□ -0.51
CX3CL1P78423 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 AC113367.3-201ENST00000508316 1912 ntBASIC11.87□□□□□ -0.51
CX3CL1P78423 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.87□□□□□ -0.51
CX3CL1P78423 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC11.87□□□□□ -0.51
CX3CL1P78423 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.87□□□□□ -0.51
CX3CL1P78423 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CX3CL1P78423 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC11.87□□□□□ -0.51
CX3CL1P78423 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 AL138725.1-201ENST00000407347 1314 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 AC063926.2-201ENST00000623766 1308 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 LBX2-201ENST00000341396 886 ntTSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CX3CL1P78423 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 ECM1P1-201ENST00000604092 1279 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 AC244669.2-201ENST00000612320 853 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CX3CL1P78423 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.86□□□□□ -0.51
CX3CL1P78423 AL122018.1-201ENST00000446607 2310 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 AC152010.1-201ENST00000415779 2006 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.86□□□□□ -0.51
CX3CL1P78423 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 FKBP4P6-201ENST00000457486 1332 ntBASIC11.86□□□□□ -0.51
CX3CL1P78423 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CX3CL1P78423 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
CX3CL1P78423 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.85□□□□□ -0.51
CX3CL1P78423 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.85□□□□□ -0.51
CX3CL1P78423 AC011474.4-201ENST00000623523 2076 ntBASIC11.85□□□□□ -0.51
CX3CL1P78423 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.85□□□□□ -0.51
CX3CL1P78423 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.85□□□□□ -0.51
CX3CL1P78423 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
CX3CL1P78423 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms