Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDE1AP54750 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PDE1AP54750 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.78■□□□□ 0.44
PDE1AP54750 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE1AP54750 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 AL160314.3-201ENST00000556041 767 ntBASIC17.78■□□□□ 0.44
PDE1AP54750 AC005730.2-201ENST00000564549 1184 ntBASIC17.78■□□□□ 0.44
PDE1AP54750 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.78■□□□□ 0.44
PDE1AP54750 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 AC005962.1-201ENST00000584100 773 ntBASIC17.78■□□□□ 0.44
PDE1AP54750 AC010328.2-201ENST00000597698 1111 ntBASIC17.78■□□□□ 0.44
PDE1AP54750 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.78■□□□□ 0.44
PDE1AP54750 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
PDE1AP54750 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PDE1AP54750 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.78■□□□□ 0.44
PDE1AP54750 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PDE1AP54750 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 AL359881.3-201ENST00000602640 1721 ntBASIC17.78■□□□□ 0.44
PDE1AP54750 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE1AP54750 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE1AP54750 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 FAM21FP-201ENST00000426241 1131 ntBASIC17.77■□□□□ 0.44
PDE1AP54750 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE1AP54750 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDE1AP54750 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.77■□□□□ 0.44
PDE1AP54750 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.77■□□□□ 0.44
PDE1AP54750 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE1AP54750 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE1AP54750 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE1AP54750 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE1AP54750 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE1AP54750 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE1AP54750 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE1AP54750 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE1AP54750 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE1AP54750 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE1AP54750 AC144522.1-201ENST00000625111 1658 ntBASIC17.77■□□□□ 0.43
PDE1AP54750 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.77■□□□□ 0.43
PDE1AP54750 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE1AP54750 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PDE1AP54750 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PDE1AP54750 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE1AP54750 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDE1AP54750 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE1AP54750 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE1AP54750 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.76■□□□□ 0.43
PDE1AP54750 FAM58BP-201ENST00000439056 645 ntBASIC17.76■□□□□ 0.43
PDE1AP54750 GOLGA2P4-201ENST00000441462 777 ntBASIC17.76■□□□□ 0.43
PDE1AP54750 AC012441.2-201ENST00000444843 739 ntBASIC17.76■□□□□ 0.43
PDE1AP54750 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms