Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SRP9P49458 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.08□□□□□ -0.32
SRP9P49458 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 RN7SL752P-201ENST00000463779 287 ntBASIC13.08□□□□□ -0.32
SRP9P49458 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.08□□□□□ -0.32
SRP9P49458 GAPDHP40-201ENST00000505218 1006 ntBASIC13.08□□□□□ -0.32
SRP9P49458 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.08□□□□□ -0.32
SRP9P49458 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 WASH4P-201ENST00000564273 1246 ntBASIC13.08□□□□□ -0.32
SRP9P49458 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.08□□□□□ -0.32
SRP9P49458 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.08□□□□□ -0.32
SRP9P49458 WFDC1-204ENST00000613603 549 ntBASIC13.08□□□□□ -0.32
SRP9P49458 CU634019.7-201ENST00000624153 1185 ntBASIC13.08□□□□□ -0.32
SRP9P49458 FP236241.2-201ENST00000624906 1185 ntBASIC13.08□□□□□ -0.32
SRP9P49458 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 AL354702.1-201ENST00000442006 1960 ntBASIC13.08□□□□□ -0.32
SRP9P49458 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.08□□□□□ -0.32
SRP9P49458 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.08□□□□□ -0.32
SRP9P49458 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.08□□□□□ -0.32
SRP9P49458 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 AL591122.2-201ENST00000624125 1853 ntBASIC13.08□□□□□ -0.32
SRP9P49458 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRP9P49458 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.07□□□□□ -0.32
SRP9P49458 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.07□□□□□ -0.32
SRP9P49458 AL645937.2-201ENST00000396808 931 ntBASIC13.07□□□□□ -0.32
SRP9P49458 AL035633.1-201ENST00000406139 838 ntBASIC13.07□□□□□ -0.32
SRP9P49458 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.07□□□□□ -0.32
SRP9P49458 TMEM198B-204ENST00000484016 896 ntBASIC13.07□□□□□ -0.32
SRP9P49458 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.07□□□□□ -0.32
SRP9P49458 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.07□□□□□ -0.32
SRP9P49458 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.07□□□□□ -0.32
SRP9P49458 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.07□□□□□ -0.32
SRP9P49458 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.07□□□□□ -0.32
SRP9P49458 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 AC124283.3-201ENST00000570869 594 ntBASIC13.07□□□□□ -0.32
SRP9P49458 SAMD11P1-201ENST00000571429 661 ntBASIC13.07□□□□□ -0.32
SRP9P49458 MIR497HG-202ENST00000572453 3838 ntBASIC13.07□□□□□ -0.32
SRP9P49458 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.07□□□□□ -0.32
SRP9P49458 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
SRP9P49458 BX539320.1-201ENST00000623759 877 ntBASIC13.07□□□□□ -0.32
SRP9P49458 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SRP9P49458 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SRP9P49458 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRP9P49458 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms