Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CENPAP49450 AL139094.1-201ENST00000405549 1188 ntBASIC13.4□□□□□ -0.26
CENPAP49450 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.4□□□□□ -0.26
CENPAP49450 TLE1P1-201ENST00000422965 589 ntBASIC13.4□□□□□ -0.26
CENPAP49450 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 AC022447.6-201ENST00000515522 438 ntBASIC13.4□□□□□ -0.26
CENPAP49450 AC022616.1-201ENST00000518688 554 ntBASIC13.4□□□□□ -0.26
CENPAP49450 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 DUX4L47-201ENST00000566374 394 ntBASIC13.4□□□□□ -0.26
CENPAP49450 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 BRI3BPP1-201ENST00000594224 787 ntBASIC13.4□□□□□ -0.26
CENPAP49450 AC093726.1-201ENST00000608064 963 ntBASIC13.4□□□□□ -0.26
CENPAP49450 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.4□□□□□ -0.26
CENPAP49450 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 AC008761.3-201ENST00000624803 892 ntBASIC13.4□□□□□ -0.26
CENPAP49450 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 CICP8-201ENST00000455800 2813 ntBASIC13.4□□□□□ -0.26
CENPAP49450 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 SLC7A15P-201ENST00000424028 1363 ntBASIC13.4□□□□□ -0.26
CENPAP49450 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 AC027601.5-201ENST00000624065 2482 ntBASIC13.4□□□□□ -0.26
CENPAP49450 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.4□□□□□ -0.26
CENPAP49450 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CENPAP49450 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.4□□□□□ -0.26
CENPAP49450 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
CENPAP49450 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CENPAP49450 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CENPAP49450 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 UGT1A2P-201ENST00000454886 866 ntBASIC13.39□□□□□ -0.27
CENPAP49450 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.39□□□□□ -0.27
CENPAP49450 CYMP-203ENST00000474680 1263 ntBASIC13.39□□□□□ -0.27
CENPAP49450 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.39□□□□□ -0.27
CENPAP49450 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.39□□□□□ -0.27
CENPAP49450 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.39□□□□□ -0.27
CENPAP49450 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 AL359711.2-201ENST00000563105 872 ntBASIC13.39□□□□□ -0.27
CENPAP49450 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
CENPAP49450 AC133539.2-201ENST00000604757 467 ntBASIC13.39□□□□□ -0.27
CENPAP49450 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 AGGF1P1-201ENST00000509500 2073 ntBASIC13.39□□□□□ -0.27
CENPAP49450 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.39□□□□□ -0.27
CENPAP49450 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.39□□□□□ -0.27
CENPAP49450 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CENPAP49450 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CENPAP49450 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CENPAP49450 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms