Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ACTG1P11-201ENST00000425411 1125 ntBASIC17.12■□□□□ 0.33
NEDD4P46934 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.12■□□□□ 0.33
NEDD4P46934 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
NEDD4P46934 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.12■□□□□ 0.33
NEDD4P46934 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.12■□□□□ 0.33
NEDD4P46934 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.12■□□□□ 0.33
NEDD4P46934 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 AC020910.6-201ENST00000623084 1459 ntBASIC17.12■□□□□ 0.33
NEDD4P46934 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
NEDD4P46934 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NEDD4P46934 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEDD4P46934 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.12■□□□□ 0.33
NEDD4P46934 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NEDD4P46934 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 AC138028.6-201ENST00000616106 1482 ntBASIC17.11■□□□□ 0.33
NEDD4P46934 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 FNTAP2-201ENST00000430308 634 ntBASIC17.11■□□□□ 0.33
NEDD4P46934 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.11■□□□□ 0.33
NEDD4P46934 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 ACTG1P17-201ENST00000558391 1119 ntBASIC17.11■□□□□ 0.33
NEDD4P46934 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.11■□□□□ 0.33
NEDD4P46934 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.11■□□□□ 0.33
NEDD4P46934 AL136295.7-201ENST00000619226 1200 ntBASIC17.11■□□□□ 0.33
NEDD4P46934 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.11■□□□□ 0.33
NEDD4P46934 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NEDD4P46934 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD4P46934 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD4P46934 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NEDD4P46934 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD4P46934 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NEDD4P46934 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD4P46934 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NEDD4P46934 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NEDD4P46934 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD4P46934 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms