Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 AL137783.1-201ENST00000623494 1896 ntBASIC13.76□□□□□ -0.21
CHMP24386 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHMP24386 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.76□□□□□ -0.21
CHMP24386 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.76□□□□□ -0.21
CHMP24386 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.76□□□□□ -0.21
CHMP24386 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.76□□□□□ -0.21
CHMP24386 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.76□□□□□ -0.21
CHMP24386 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CHMP24386 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 AC090505.1-201ENST00000430515 1834 ntBASIC13.76□□□□□ -0.21
CHMP24386 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.76□□□□□ -0.21
CHMP24386 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CHMP24386 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CHMP24386 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 AL356585.2-201ENST00000625078 2396 ntBASIC13.75□□□□□ -0.21
CHMP24386 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.75□□□□□ -0.21
CHMP24386 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CHMP24386 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 CNN2P8-201ENST00000421872 913 ntBASIC13.75□□□□□ -0.21
CHMP24386 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 RPS2P32-201ENST00000439199 892 ntBASIC13.75□□□□□ -0.21
CHMP24386 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.75□□□□□ -0.21
CHMP24386 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.75□□□□□ -0.21
CHMP24386 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 RN7SL48P-201ENST00000579283 293 ntBASIC13.75□□□□□ -0.21
CHMP24386 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.75□□□□□ -0.21
CHMP24386 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.75□□□□□ -0.21
CHMP24386 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CHMP24386 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CHMP24386 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 AL138709.1-201ENST00000614840 1693 ntBASIC13.75□□□□□ -0.21
CHMP24386 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
CHMP24386 TCAF1P1-201ENST00000414990 2232 ntBASIC13.75□□□□□ -0.21
CHMP24386 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CHMP24386 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms