Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC073413.1-201ENST00000603927 732 ntBASIC14.33□□□□□ -0.12
CDH1P12830 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH1P12830 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CDH1P12830 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH1P12830 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.33□□□□□ -0.12
CDH1P12830 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 MRPL37P1-201ENST00000592451 1337 ntBASIC14.33□□□□□ -0.12
CDH1P12830 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CDH1P12830 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDH1P12830 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDH1P12830 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDH1P12830 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.32□□□□□ -0.12
CDH1P12830 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH1P12830 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 AC004945.1-201ENST00000416738 983 ntBASIC14.32□□□□□ -0.12
CDH1P12830 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH1P12830 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH1P12830 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH1P12830 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH1P12830 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH1P12830 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH1P12830 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH1P12830 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.32□□□□□ -0.12
CDH1P12830 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.32□□□□□ -0.12
CDH1P12830 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 RN7SL713P-201ENST00000582127 302 ntBASIC14.32□□□□□ -0.12
CDH1P12830 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 CR383656.2-201ENST00000548656 2254 ntBASIC14.32□□□□□ -0.12
CDH1P12830 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDH1P12830 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.32□□□□□ -0.12
CDH1P12830 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.32□□□□□ -0.12
CDH1P12830 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDH1P12830 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 AC126335.2-201ENST00000623362 4637 ntBASIC14.31□□□□□ -0.12
CDH1P12830 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CDH1P12830 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CDH1P12830 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDH1P12830 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH1P12830 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms