Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
IFNA1P01562 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
IFNA1P01562 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
IFNA1P01562 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.63□□□□□ -0.55
IFNA1P01562 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.63□□□□□ -0.55
IFNA1P01562 RNPS1P1-201ENST00000507437 918 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.63□□□□□ -0.55
IFNA1P01562 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.63□□□□□ -0.55
IFNA1P01562 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
IFNA1P01562 AC068137.2-201ENST00000605408 478 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.63□□□□□ -0.55
IFNA1P01562 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
IFNA1P01562 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.63□□□□□ -0.55
IFNA1P01562 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
IFNA1P01562 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
IFNA1P01562 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.62□□□□□ -0.55
IFNA1P01562 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.62□□□□□ -0.55
IFNA1P01562 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 AC092364.2-202ENST00000597012 1073 ntBASIC11.62□□□□□ -0.55
IFNA1P01562 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
IFNA1P01562 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 AP000437.1-201ENST00000624057 2085 ntBASIC11.62□□□□□ -0.55
IFNA1P01562 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 PNPLA7-202ENST00000406427 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC11.62□□□□□ -0.55
IFNA1P01562 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
IFNA1P01562 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
IFNA1P01562 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
IFNA1P01562 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms