Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11□□□□□ -0.65
SH2D1AO60880 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11□□□□□ -0.65
SH2D1AO60880 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11□□□□□ -0.65
SH2D1AO60880 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11□□□□□ -0.65
SH2D1AO60880 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SH2D1AO60880 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SH2D1AO60880 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SH2D1AO60880 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 AL365181.3-201ENST00000605886 3222 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SH2D1AO60880 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 HNRNPA3P1-201ENST00000401429 1139 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.99□□□□□ -0.65
SH2D1AO60880 CNN2P2-201ENST00000443536 909 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 CNN2P3-201ENST00000450201 906 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 HNRNPA3P5-201ENST00000455201 833 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.99□□□□□ -0.65
SH2D1AO60880 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC069120.2-201ENST00000524091 540 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.99□□□□□ -0.65
SH2D1AO60880 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 AL121894.2-201ENST00000602977 491 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 AL136317.3-201ENST00000618497 906 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC114271.1-201ENST00000612689 2813 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 TUBB8P4-201ENST00000511806 1324 ntBASIC10.99□□□□□ -0.65
SH2D1AO60880 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SH2D1AO60880 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SH2D1AO60880 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC10.99□□□□□ -0.65
SH2D1AO60880 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SH2D1AO60880 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SH2D1AO60880 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SH2D1AO60880 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SH2D1AO60880 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms