Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 KRT18P36-201ENST00000411618 1276 ntBASIC19.17■□□□□ 0.66
APAF1O14727 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 AC244107.1-201ENST00000442033 332 ntBASIC19.17■□□□□ 0.66
APAF1O14727 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC19.17■□□□□ 0.66
APAF1O14727 AC092658.1-201ENST00000505836 891 ntBASIC19.17■□□□□ 0.66
APAF1O14727 ZNF767P-206ENST00000513792 565 ntBASIC19.17■□□□□ 0.66
APAF1O14727 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.17■□□□□ 0.66
APAF1O14727 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.17■□□□□ 0.66
APAF1O14727 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 AC003686.1-201ENST00000550956 1034 ntBASIC19.17■□□□□ 0.66
APAF1O14727 RN7SL219P-201ENST00000582872 296 ntBASIC19.17■□□□□ 0.66
APAF1O14727 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 AC004923.1-202ENST00000642106 209 ntBASIC19.17■□□□□ 0.66
APAF1O14727 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
APAF1O14727 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
APAF1O14727 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
APAF1O14727 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.16■□□□□ 0.66
APAF1O14727 NKAIN1P1-201ENST00000435754 582 ntBASIC19.16■□□□□ 0.66
APAF1O14727 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.16■□□□□ 0.66
APAF1O14727 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 AC044849.1-201ENST00000519737 1188 ntBASIC19.16■□□□□ 0.66
APAF1O14727 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC19.16■□□□□ 0.66
APAF1O14727 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.16■□□□□ 0.66
APAF1O14727 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.16■□□□□ 0.66
APAF1O14727 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.16■□□□□ 0.66
APAF1O14727 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
APAF1O14727 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.16■□□□□ 0.66
APAF1O14727 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
APAF1O14727 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC19.16■□□□□ 0.66
APAF1O14727 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
APAF1O14727 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC19.16■□□□□ 0.66
APAF1O14727 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.15■□□□□ 0.66
APAF1O14727 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
APAF1O14727 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC19.15■□□□□ 0.66
APAF1O14727 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
APAF1O14727 SERPINA13P-202ENST00000478994 924 ntBASIC19.15■□□□□ 0.66
APAF1O14727 AC126915.1-201ENST00000522847 1038 ntBASIC19.15■□□□□ 0.66
APAF1O14727 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC19.15■□□□□ 0.66
APAF1O14727 SNORD3B-2-202ENST00000571722 791 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms