Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SCN5A-210ENST00000455624 7170 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AC092028.1-202ENST00000641483 3547 ntBASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AC092028.1-201ENST00000641781 3540 ntBASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 FKBP4-201ENST00000001008 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 FN1-203ENST00000354785 8905 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CHKB-CPT1BH3BT56 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 HERC2P2-205ENST00000619021 5746 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FLII-221ENST00000578558 2377 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RPS2P55-201ENST00000397318 883 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RPL5P21-201ENST00000404620 815 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNRF2P3-201ENST00000424200 374 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 TPT1P11-201ENST00000458482 498 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC107956.1-201ENST00000494359 873 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 GUSBP12-201ENST00000513727 720 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC098934.4-201ENST00000564127 592 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC087623.3-201ENST00000607047 1098 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 KIF28P-202ENST00000504864 3064 ntBASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 PLSCR1-201ENST00000342435 2233 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 IFT172-201ENST00000260570 5415 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CHKB-CPT1BH3BT56 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC8.03□□□□□ -1.12
CHKB-CPT1BH3BT56 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms