Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 RPSAP31-201ENST00000416648 895 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 AC073869.2-201ENST00000417338 1026 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 NPM1P43-201ENST00000558669 786 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 DNM1P30-201ENST00000563586 452 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 RN7SL555P-201ENST00000584742 339 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 AC087045.2-201ENST00000606279 1003 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 AC087392.5-201ENST00000612517 489 ntBASIC12.73□□□□□ -0.37
MBD3L3A6NE82 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
MBD3L3A6NE82 PCDHA3-202ENST00000532566 4594 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 OR8T1P-201ENST00000421347 918 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 AC253536.4-201ENST00000440539 267 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 RPL7P35-201ENST00000446943 740 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ORAOV1P1-201ENST00000503108 395 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 MIR5572-201ENST00000583188 137 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 AC007881.3-201ENST00000608897 607 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 MIR7845-201ENST00000618396 99 ntBASIC12.72□□□□□ -0.37
MBD3L3A6NE82 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
MBD3L3A6NE82 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 CCT8L1P-201ENST00000465400 1674 ntBASIC12.71□□□□□ -0.37
MBD3L3A6NE82 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
MBD3L3A6NE82 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms