Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HDAC5Q9UQL6 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 LINC02228-204ENST00000642115 2962 ntBASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AC003686.1-201ENST00000550956 1034 ntBASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AC103810.3-201ENST00000583567 96 ntBASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AL591471.1-201ENST00000621855 229 ntBASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC5Q9UQL6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 NKAIN1P1-201ENST00000435754 582 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 XBP1P1-201ENST00000436573 652 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AKR7A2P1-201ENST00000460134 915 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AC009779.1-201ENST00000551138 283 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AC124068.2-201ENST00000569473 1109 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 AC104506.1-201ENST00000609247 429 ntBASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC5Q9UQL6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 BX284668.4-201ENST00000453917 508 ntBASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AC140658.4-201ENST00000561990 352 ntBASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 AL451050.2-201ENST00000606967 682 ntBASIC18.22■□□□□ 0.51
HDAC5Q9UQL6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms