Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 AC018442.1-201ENST00000421439 2061 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 KRT17P5-201ENST00000332088 839 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 MRPL22P1-201ENST00000505398 616 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 AC087392.5-201ENST00000612517 489 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 HLA-C-210ENST00000640219 976 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 AC015688.4-201ENST00000580780 1647 ntBASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DNMT3BQ9UBC3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AP002353.1-201ENST00000528257 1599 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 Z69890.1-201ENST00000382990 339 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC114501.1-201ENST00000445949 172 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 RPL18AP3-201ENST00000462885 528 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC025262.2-201ENST00000623975 1056 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AP001184.1-201ENST00000637936 376 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC026748.1-201ENST00000624349 3251 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 MARK2P16-201ENST00000605714 1723 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
DNMT3BQ9UBC3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 NFIC-211ENST00000641145 8399 ntBASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DNMT3BQ9UBC3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms