Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC023824.1-201ENST00000562945 2975 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC005586.2-201ENST00000563946 837 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC242376.2-201ENST00000619355 883 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AC090386.2-201ENST00000623010 1039 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 BRD7P5-201ENST00000299197 1822 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 AP001267.2-201ENST00000532619 2086 ntBASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PAAF1Q9BRP4 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC074138.1-201ENST00000611182 1303 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 OR8T1P-201ENST00000421347 918 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC008267.1-201ENST00000474858 1069 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC022447.6-201ENST00000515522 438 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC007881.3-201ENST00000608897 607 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AC009560.1-201ENST00000620208 434 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 AL591471.1-201ENST00000621855 229 ntBASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
PAAF1Q9BRP4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 AC097359.2-201ENST00000604992 2389 ntBASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 LAP3P2-201ENST00000454686 1454 ntBASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PAAF1Q9BRP4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.45■□□□□ 0.06
PAAF1Q9BRP4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms