Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 MAPT-IT1-201ENST00000624111 3016 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 KRT8P24-201ENST00000560290 1559 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 AC022144.1-201ENST00000602255 1580 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 AL031595.1-201ENST00000623969 4709 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 AC130686.1-201ENST00000622936 2466 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 AC020910.6-201ENST00000623084 1459 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 AL136172.1-201ENST00000598590 1394 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CES1P1-201ENST00000421606 1704 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 RNU1-114P-201ENST00000365297 166 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.19□□□□□ -0.62
VGLL1Q99990 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.19□□□□□ -0.62
VGLL1Q99990 DOC2GP-202ENST00000514950 1163 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 AP001582.1-201ENST00000525856 295 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.19□□□□□ -0.62
VGLL1Q99990 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
VGLL1Q99990 AL390955.2-201ENST00000603032 514 ntBASIC11.19□□□□□ -0.62
VGLL1Q99990 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.19□□□□□ -0.62
VGLL1Q99990 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.19□□□□□ -0.62
VGLL1Q99990 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.19□□□□□ -0.62
VGLL1Q99990 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
VGLL1Q99990 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
VGLL1Q99990 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.18□□□□□ -0.62
VGLL1Q99990 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
VGLL1Q99990 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms