Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC092570.1-201ENST00000414446 469 ntBASIC15.76■□□□□ 0.11
LRCH3Q96II8 AHCYP3-201ENST00000420053 1279 ntBASIC15.76■□□□□ 0.11
LRCH3Q96II8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC108724.1-201ENST00000481669 352 ntBASIC15.76■□□□□ 0.11
LRCH3Q96II8 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC069224.1-201ENST00000566372 1715 ntBASIC15.76■□□□□ 0.11
LRCH3Q96II8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRCH3Q96II8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRCH3Q96II8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AL157414.3-201ENST00000624276 1954 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 AL136379.1-201ENST00000623471 2642 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC022532.1-201ENST00000624563 1728 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 CICP12-201ENST00000455801 843 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 BPIFB5P-201ENST00000457066 1099 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 SCARNA12-201ENST00000459155 270 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC090136.2-201ENST00000517809 420 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 OR5BD1P-201ENST00000532527 817 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 TRMT112P3-201ENST00000580149 358 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AC012508.2-201ENST00000567613 1472 ntBASIC15.75■□□□□ 0.11
LRCH3Q96II8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRCH3Q96II8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRCH3Q96II8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 AC011477.6-201ENST00000604980 1927 ntBASIC15.74■□□□□ 0.11
LRCH3Q96II8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRCH3Q96II8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRCH3Q96II8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms