Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 HSPB1P2-201ENST00000448722 546 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 IGHJ2P-201ENST00000454480 60 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 AC021723.1-201ENST00000486306 515 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 AC106794.1-201ENST00000506935 792 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 OR10B1P-201ENST00000601666 907 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 AL096828.3-201ENST00000615354 462 ntBASIC13.34□□□□□ -0.27
LRRC46Q96FV0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRC46Q96FV0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 AL023775.1-201ENST00000454907 1746 ntBASIC13.33□□□□□ -0.27
LRRC46Q96FV0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRC46Q96FV0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 FNTAP2-201ENST00000430308 634 ntBASIC13.33□□□□□ -0.28
LRRC46Q96FV0 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.33□□□□□ -0.28
LRRC46Q96FV0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 AC027601.5-201ENST00000624065 2482 ntBASIC13.33□□□□□ -0.28
LRRC46Q96FV0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRC46Q96FV0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms