Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.83■□□□□ 0.45
RPGRQ92834 LAP3P2-201ENST00000454686 1454 ntBASIC17.83■□□□□ 0.45
RPGRQ92834 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RPGRQ92834 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RPGRQ92834 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RPGRQ92834 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPGRQ92834 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.83■□□□□ 0.44
RPGRQ92834 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.83■□□□□ 0.44
RPGRQ92834 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.83■□□□□ 0.44
RPGRQ92834 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC17.83■□□□□ 0.44
RPGRQ92834 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.83■□□□□ 0.44
RPGRQ92834 AC068867.1-201ENST00000559855 150 ntBASIC17.83■□□□□ 0.44
RPGRQ92834 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.83■□□□□ 0.44
RPGRQ92834 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC17.83■□□□□ 0.44
RPGRQ92834 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.83■□□□□ 0.44
RPGRQ92834 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RPGRQ92834 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
RPGRQ92834 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
RPGRQ92834 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
RPGRQ92834 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPGRQ92834 NORAD-201ENST00000565493 5339 ntBASIC17.83■□□□□ 0.44
RPGRQ92834 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 AL591122.2-201ENST00000624125 1853 ntBASIC17.82■□□□□ 0.44
RPGRQ92834 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 STK16-203ENST00000409516 895 ntTSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 CSNK1G2P1-201ENST00000442675 955 ntBASIC17.82■□□□□ 0.44
RPGRQ92834 RGS5-216ENST00000449680 788 ntTSL 3 BASIC17.82■□□□□ 0.44
RPGRQ92834 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC17.82■□□□□ 0.44
RPGRQ92834 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.82■□□□□ 0.44
RPGRQ92834 AC024293.1-201ENST00000467930 498 ntBASIC17.82■□□□□ 0.44
RPGRQ92834 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 AC005586.2-201ENST00000563946 837 ntBASIC17.82■□□□□ 0.44
RPGRQ92834 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RPGRQ92834 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
RPGRQ92834 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPGRQ92834 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RPGRQ92834 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPGRQ92834 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.81■□□□□ 0.44
RPGRQ92834 PSMD4P1-201ENST00000433951 1109 ntBASIC17.81■□□□□ 0.44
RPGRQ92834 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms