Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AC004898.1-201ENST00000451057 766 ntBASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SNORD3B-2-202ENST00000571722 791 ntBASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ZIC4Q8N9L1 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
ZIC4Q8N9L1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ZIC4Q8N9L1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 KRT18P36-201ENST00000411618 1276 ntBASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 NKAIN1P1-201ENST00000435754 582 ntBASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AC044849.1-201ENST00000519737 1188 ntBASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AC124068.2-201ENST00000569473 1109 ntBASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AC090164.2-201ENST00000611487 516 ntBASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.89□□□□□ -0.35
ZIC4Q8N9L1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms