Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AC015688.4-201ENST00000580780 1647 ntBASIC10.73□□□□□ -0.69
APOC4P55056 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 CICP23-201ENST00000605013 2741 ntBASIC10.73□□□□□ -0.69
APOC4P55056 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AC073957.3-201ENST00000609998 6758 ntBASIC10.73□□□□□ -0.69
APOC4P55056 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 AC139712.1-201ENST00000378256 1875 ntBASIC10.73□□□□□ -0.69
APOC4P55056 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.73□□□□□ -0.69
APOC4P55056 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 TPI1-206ENST00000488464 791 ntTSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 AC006122.1-201ENST00000493323 440 ntBASIC10.73□□□□□ -0.69
APOC4P55056 HLA-J-204ENST00000495278 958 ntBASIC10.73□□□□□ -0.69
APOC4P55056 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 AC245884.6-201ENST00000515672 1067 ntBASIC10.73□□□□□ -0.69
APOC4P55056 SCARNA21-201ENST00000517026 139 ntBASIC10.73□□□□□ -0.69
APOC4P55056 SDHD-202ENST00000525291 790 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 AC009779.1-201ENST00000551138 283 ntBASIC10.73□□□□□ -0.69
APOC4P55056 AL160314.3-201ENST00000556041 767 ntBASIC10.73□□□□□ -0.69
APOC4P55056 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 SNORD3B-2-202ENST00000571722 791 ntBASIC10.73□□□□□ -0.69
APOC4P55056 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC10.73□□□□□ -0.69
APOC4P55056 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.73□□□□□ -0.69
APOC4P55056 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 AL645939.5-201ENST00000606834 243 ntBASIC10.73□□□□□ -0.69
APOC4P55056 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AC092384.3-202ENST00000564646 2873 ntBASIC10.73□□□□□ -0.69
APOC4P55056 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 FUK-202ENST00000378912 3925 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 AL590440.2-201ENST00000641973 1595 ntBASIC10.73□□□□□ -0.69
APOC4P55056 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
APOC4P55056 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
APOC4P55056 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.73□□□□□ -0.69
APOC4P55056 SLC9A7P1-201ENST00000554295 3311 ntBASIC10.73□□□□□ -0.69
APOC4P55056 AC144522.1-201ENST00000625111 1658 ntBASIC10.73□□□□□ -0.69
APOC4P55056 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
APOC4P55056 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
APOC4P55056 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
APOC4P55056 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.72□□□□□ -0.69
APOC4P55056 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms