Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHB4P54760 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 AL627231.1-201ENST00000394467 1125 ntBASIC16.51■□□□□ 0.23
EPHB4P54760 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 AC090857.1-201ENST00000527400 390 ntBASIC16.51■□□□□ 0.23
EPHB4P54760 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.51■□□□□ 0.23
EPHB4P54760 AC100827.2-201ENST00000563214 1194 ntBASIC16.51■□□□□ 0.23
EPHB4P54760 AC141586.1-203ENST00000567242 366 ntBASIC16.51■□□□□ 0.23
EPHB4P54760 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.51■□□□□ 0.23
EPHB4P54760 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
EPHB4P54760 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHB4P54760 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.51■□□□□ 0.23
EPHB4P54760 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.51■□□□□ 0.23
EPHB4P54760 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
EPHB4P54760 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 AC097065.1-201ENST00000425737 517 ntBASIC16.5■□□□□ 0.23
EPHB4P54760 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHB4P54760 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHB4P54760 MESTP3-201ENST00000503460 968 ntBASIC16.5■□□□□ 0.23
EPHB4P54760 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHB4P54760 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.5■□□□□ 0.23
EPHB4P54760 AL136301.1-201ENST00000615830 422 ntBASIC16.5■□□□□ 0.23
EPHB4P54760 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
EPHB4P54760 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
EPHB4P54760 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.5■□□□□ 0.23
EPHB4P54760 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
EPHB4P54760 AC055811.4-201ENST00000624039 1754 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
EPHB4P54760 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 OR2K2-202ENST00000374428 1038 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHB4P54760 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.49■□□□□ 0.23
EPHB4P54760 RCC2P8-201ENST00000502779 1035 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms