Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 MIR7845-201ENST00000618396 99 ntBASIC15.1■□□□□ 0.01
ATXN3P54252 ENPP7P14-201ENST00000621765 1040 ntBASIC15.1■□□□□ 0.01
ATXN3P54252 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.1■□□□□ 0.01
ATXN3P54252 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.1■□□□□ 0.01
ATXN3P54252 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.1■□□□□ 0.01
ATXN3P54252 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.1■□□□□ 0.01
ATXN3P54252 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ATXN3P54252 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ATXN3P54252 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ATXN3P54252 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.09■□□□□ 0.01
ATXN3P54252 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.09■□□□□ 0.01
ATXN3P54252 LDHBP1-201ENST00000455730 1119 ntBASIC15.09■□□□□ 0.01
ATXN3P54252 AC005740.2-201ENST00000511085 419 ntBASIC15.09■□□□□ 0.01
ATXN3P54252 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.09■□□□□ 0.01
ATXN3P54252 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ATXN3P54252 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 MROH4P-201ENST00000431302 1578 ntBASIC15.09■□□□□ 0.01
ATXN3P54252 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 AC126335.2-201ENST00000623362 4637 ntBASIC15.09■□□□□ 0.01
ATXN3P54252 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.09■□□□□ 0.01
ATXN3P54252 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
ATXN3P54252 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ATXN3P54252 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.09■□□□□ 0.01
ATXN3P54252 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATXN3P54252 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.08■□□□□ 0.01
ATXN3P54252 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATXN3P54252 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATXN3P54252 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATXN3P54252 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ATXN3P54252 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.08■□□□□ 0
ATXN3P54252 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
ATXN3P54252 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.08■□□□□ 0
ATXN3P54252 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.08■□□□□ 0
ATXN3P54252 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.08■□□□□ 0
ATXN3P54252 AC253536.4-201ENST00000440539 267 ntBASIC15.08■□□□□ 0
ATXN3P54252 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.08■□□□□ 0
ATXN3P54252 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 FTLP1-201ENST00000449155 526 ntBASIC15.08■□□□□ 0
ATXN3P54252 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.08■□□□□ 0
ATXN3P54252 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.08■□□□□ 0
ATXN3P54252 AC021723.1-201ENST00000486306 515 ntBASIC15.08■□□□□ 0
ATXN3P54252 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.08■□□□□ 0
ATXN3P54252 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms