Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.72■□□□□ 0.11
SSR1P43307 ENPP7P5-201ENST00000541031 1031 ntBASIC15.72■□□□□ 0.11
SSR1P43307 SPCS2P1-201ENST00000561636 679 ntBASIC15.72■□□□□ 0.11
SSR1P43307 WASH4P-201ENST00000564273 1246 ntBASIC15.72■□□□□ 0.11
SSR1P43307 AP001063.1-201ENST00000568332 529 ntBASIC15.72■□□□□ 0.11
SSR1P43307 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.72■□□□□ 0.11
SSR1P43307 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SSR1P43307 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.72■□□□□ 0.11
SSR1P43307 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSR1P43307 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SSR1P43307 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 KRT8P35-201ENST00000483942 1338 ntBASIC15.71■□□□□ 0.11
SSR1P43307 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SSR1P43307 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 AC007969.1-201ENST00000433675 447 ntBASIC15.71■□□□□ 0.11
SSR1P43307 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.71■□□□□ 0.11
SSR1P43307 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 AC190387.1-201ENST00000551683 408 ntBASIC15.71■□□□□ 0.11
SSR1P43307 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.71■□□□□ 0.11
SSR1P43307 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.71■□□□□ 0.11
SSR1P43307 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.71■□□□□ 0.11
SSR1P43307 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSR1P43307 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SSR1P43307 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
SSR1P43307 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSR1P43307 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 AC015802.1-201ENST00000588104 1449 ntBASIC15.7■□□□□ 0.1
SSR1P43307 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms