Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC1A1P43005 RN7SL752P-201ENST00000463779 287 ntBASIC15.34■□□□□ 0.05
SLC1A1P43005 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC1A1P43005 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.34■□□□□ 0.05
SLC1A1P43005 AP003171.2-201ENST00000528208 925 ntBASIC15.34■□□□□ 0.05
SLC1A1P43005 SLC25A47P1-201ENST00000531577 414 ntBASIC15.34■□□□□ 0.05
SLC1A1P43005 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A1P43005 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.34■□□□□ 0.05
SLC1A1P43005 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC1A1P43005 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.34■□□□□ 0.05
SLC1A1P43005 AC027307.3-201ENST00000594262 1100 ntBASIC15.34■□□□□ 0.05
SLC1A1P43005 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SLC1A1P43005 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SLC1A1P43005 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SLC1A1P43005 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A1P43005 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC1A1P43005 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A1P43005 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A1P43005 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC1A1P43005 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A1P43005 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC1A1P43005 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.33■□□□□ 0.05
SLC1A1P43005 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
SLC1A1P43005 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SLC1A1P43005 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A1P43005 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC007326.2-201ENST00000624224 7579 ntBASIC15.33■□□□□ 0.04
SLC1A1P43005 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A1P43005 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 RN7SL837P-201ENST00000463010 287 ntBASIC15.33■□□□□ 0.04
SLC1A1P43005 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC1A1P43005 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC1A1P43005 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SLC1A1P43005 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC027601.3-201ENST00000622907 509 ntBASIC15.33■□□□□ 0.04
SLC1A1P43005 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 AC006453.4-201ENST00000636949 1252 ntBASIC15.33■□□□□ 0.04
SLC1A1P43005 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.33■□□□□ 0.04
SLC1A1P43005 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC1A1P43005 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A1P43005 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
SLC1A1P43005 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
SLC1A1P43005 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC1A1P43005 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AC023794.5-201ENST00000564380 2157 ntBASIC15.32■□□□□ 0.04
SLC1A1P43005 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC1A1P43005 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SLC1A1P43005 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC1A1P43005 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC1A1P43005 AL136309.1-201ENST00000403917 691 ntBASIC15.32■□□□□ 0.04
SLC1A1P43005 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms